sharp
Stability-enHanced Approaches using Resampling Procedures
In stability selection (N Meinshausen, P Bühlmann (2010) doi:10.1111/j.1467-9868.2010.00740.x) and consensus clustering (S Monti et al (2003) doi:10.1023/A:1023949509487), resampling techniques are used to enhance the reliability of the results. In this package, hyper-parameters are calibrated by maximising model stability, which is measured under the null hypothesis that all selection (or co-membership) probabilities are identical (B Bodinier et al (2023a) doi:10.1093/jrsssc/qlad058 and B Bodinier et al (2023b) doi:10.1093/bioinformatics/btad635). Functions are readily implemented for the use of LASSO regression, sparse PCA, sparse (group) PLS or graphical LASSO in stability selection, and hierarchical clustering, partitioning around medoids, K means or Gaussian mixture models in consensus clustering.
- Version1.4.6
- R versionunknown
- LicenseGPL (≥ 3)
- Needs compilation?No
- Languageen-GB
- N Meinshausen, P Bühlmann (2010)
- S Monti et al (2003)
- B Bodinier et al (2023a)
- B Bodinier et al (2023b)
- Last release02/03/2024
Documentation
Team
Barbara Bodinier
Insights
Last 30 days
This package has been downloaded 341 times in the last 30 days. More than a random curiosity, but not quite a blockbuster. Still, it's gaining traction! The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 8 times.
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Last 365 days
This package has been downloaded 3,433 times in the last 365 days. That's enough downloads to impress a room full of undergrads. A commendable achievement indeed. The day with the most downloads was Aug 01, 2024 with 42 downloads.
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Dependencies
- Depends1 package
- Imports12 packages
- Suggests15 packages