shazam
Immunoglobulin Somatic Hypermutation Analysis
Provides a computational framework for analyzing mutations in immunoglobulin (Ig) sequences. Includes methods for Bayesian estimation of antigen-driven selection pressure, mutational load quantification, building of somatic hypermutation (SHM) models, and model-dependent distance calculations. Also includes empirically derived models of SHM for both mice and humans. Citations: Gupta and Vander Heiden, et al (2015), Yaari, et al (2012), Yaari, et al (2013), Cui, et al (2016).
- Version1.2.0
- R versionunknown
- LicenseAGPL-3
- Needs compilation?No
- shazam citation info
- Last release10/02/2023
Documentation
Team
Susanna Marquez
Jason Vander Heiden
Show author detailsRolesAuthorNamita Gupta
Show author detailsRolesAuthorNima Nouri
Show author detailsRolesAuthorJulian Zhou
Show author detailsRolesAuthorSteven Kleinstein
Show author detailsRolesAuthor, Copyright holderMohamed Uduman
Show author detailsRolesAuthorNoah Yann Lee
Show author detailsRolesAuthorAng Cui
Show author detailsRolesContributorGur Yaari
Show author detailsRolesAuthor
Insights
Last 30 days
This package has been downloaded 802 times in the last 30 days. Not bad! The download count is somewhere between 'small-town buzz' and 'moderate academic conference'. The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 27 times.
The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.
Last 365 days
This package has been downloaded 9,239 times in the last 365 days. That's a lot of interest! Someone might even write a blog post about it. The day with the most downloads was Jan 08, 2025 with 138 downloads.
The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.
Data provided by CRAN
Binaries
Dependencies
- Depends1 package
- Imports18 packages
- Suggests3 packages
- Reverse Imports2 packages