sumFREGAT
Fast Region-Based Association Tests on Summary Statistics
An adaptation of classical region/gene-based association analysis techniques to the use of summary statistics (P values and effect sizes) and correlations between genetic variants as input. It is a tool to perform the most popular and efficient gene-based tests using the results of genome-wide association (meta-)analyses without having the original genotypes and phenotypes at hand. See for details: Svishcheva et al (2019) Gene-based association tests using GWAS summary statistics. Bioinformatics. Belonogova et al (2022) SumSTAAR: A flexible framework for gene-based association studies using GWAS summary statistics. PLOS Comp Biol.
- Version1.2.5
- R versionunknown
- LicenseGPL-3
- Needs compilation?Yes
- Last release06/07/2022
Documentation
Team
Nadezhda M. Belonogova
Minghui Wang
Show author detailsRolesContributorThomas Lumley
Show author detailsRolesContributorHan Chen
Show author detailsRolesContributorPierre Lafaye de Micheaux
Show author detailsRolesContributorYiyuan Liu
Show author detailsRolesContributorShizhong Han
Show author detailsRolesContributorSeunggeun Lee
Show author detailsRolesContributorGulnara R. Svishcheva
Show author detailsRolesAuthorYaowu Liu
Show author detailsRolesContributorJames O. Ramsay
Show author detailsRolesContributorXihao Li
Show author detailsRolesContributorZilin Li
Show author detailsRolesContributor
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- Imports3 packages
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