superspreading

Understand Individual-Level Variation in Infectious Disease Transmission

CRAN Package

Estimate and understand individual-level variation in transmission. Implements density and cumulative compound Poisson discrete distribution functions ('Kremer et al.' (2021) doi:10.1038/s41598-021-93578-x), as well as functions to calculate infectious disease outbreak statistics given epidemiological parameters on individual-level transmission; including the probability of an outbreak becoming an epidemic/extinct ('Kucharski et al.' (2020) doi:10.1016/S1473-3099(20)30144-4), or the cluster size statistics, e.g. what proportion of cases cause X% of transmission ('Lloyd-Smith et al.' (2005) doi:10.1038/nature04153).

  • Version0.3.0
  • R versionunknown
  • LicenseMIT
  • Needs compilation?No
  • Languageen-GB
  • Last release01/27/2025

Documentation


Team


Insights

Last 30 days

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Last 365 days

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Data provided by CRAN


Binaries


Dependencies

  • Imports2 packages
  • Suggests10 packages