CRAN/E | surveyvoi

surveyvoi

Survey Value of Information

Installation

About

Decision support tool for prioritizing sites for ecological surveys based on their potential to improve plans for conserving biodiversity (e.g. plans for establishing protected areas). Given a set of sites that could potentially be acquired for conservation management, it can be used to generate and evaluate plans for surveying additional sites. Specifically, plans for ecological surveys can be generated using various conventional approaches (e.g. maximizing expected species richness, geographic coverage, diversity of sampled environmental algorithms. After generating such survey plans, they can be evaluated using conditions) and maximizing value of information. Please note that several functions depend on the 'Gurobi' optimization software (available from ). Additionally, the 'JAGS' software (available from ) is required to fit hierarchical generalized linear models. For further details, see Hanson et al. (2022) doi:10.1111/1365-2664.14309.

Citation surveyvoi citation info
prioritizr.github.io/surveyvoi/
System requirements JAGS (>= 4.3.0) (optional), fftw3 (>= 3.3), gmp (>= 6.2.1), gmpxx (>= 6.2.1), mpfr (>= 3.0.0), autoconf (>= 2.69), automake (>= 1.16.5)
Bug report File report

Key Metrics

Version 1.0.6
R ≥ 4.0.0
Published 2024-02-16 159 days ago
Needs compilation? yes
License GPL-3
CRAN checks surveyvoi results
Language en-US

Downloads

Yesterday 5 0%
Last 7 days 34 -43%
Last 30 days 431 -39%
Last 90 days 1.831 -11%
Last 365 days 7.341 +48%

Maintainer

Maintainer

Jeffrey O Hanson

Authors

Jeffrey O Hanson

aut / cre

Iadine Chadès

aut

Emma J Hudgins

aut

Joseph R Bennett

aut

Material

README
NEWS
Reference manual
Package source

Vignettes

surveyvoi: Survey Value of Information

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

surveyvoi archive

Depends

R ≥ 4.0.0
Matrix
sf ≥ 0.8.0
nloptr ≥ 1.2.2.2

Imports

utils
methods
stats
parallel
progress ≥ 1.2.2
assertthat ≥ 0.2.0
xgboost ≥ 1.5.2.1
plyr ≥ 1.8.4
withr ≥ 2.1.2
tibble ≥ 2.1.3
scales ≥ 1.0.0
doParallel ≥ 1.0.15
dplyr ≥ 0.8.3
vegan ≥ 2.5-6
RcppAlgos ≥ 2.3.6
groupdata2 ≥ 1.3.0
Rcpp ≥ 0.12.19
Rsymphony ≥ 0.1-31

Suggests

testthat ≥ 3.1.2
knitr ≥ 1.20
roxygen2 ≥ 6.1.0
rmarkdown ≥ 1.10
tidyr ≥ 1.0.0
ggplot2 ≥ 3.2.1
gridExtra ≥ 2.3
viridis ≥ 0.5.1
PoissonBinomial ≥1.1.1
gurobi ≥ 8.1.0
Rmpfr ≥ 0.8-1
runjags ≥2.0.4.6

LinkingTo

Rcpp ≥ 0.12.19
RcppEigen ≥ 0.3.3.7.0
PoissonBinomial ≥ 1.1.1
nloptr ≥ 1.2.2.2