susieR

Sum of Single Effects Linear Regression

CRAN Package

Implements methods for variable selection in linear regression based on the "Sum of Single Effects" (SuSiE) model, as described in Wang et al (2020) <doi:10.1101/501114> and Zou et al (2021) <doi:10.1101/2021.11.03.467167>. These methods provide simple summaries, called "Credible Sets", for accurately quantifying uncertainty in which variables should be selected. The methods are motivated by genetic fine-mapping applications, and are particularly well-suited to settings where variables are highly correlated and detectable effects are sparse. The fitting algorithm, a Bayesian analogue of stepwise selection methods called "Iterative Bayesian Stepwise Selection" (IBSS), is simple and fast, allowing the SuSiE model be fit to large data sets (thousands of samples and hundreds of thousands of variables).


Documentation


Team


Insights

Last 30 days

This package has been downloaded 3,621 times in the last 30 days. Consider this 'mid-tier influencer' status—if it were a TikTok, it would get a nod from nieces and nephews. The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 41 times.

Sun
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Sat
0 downloadsMar 2, 2025
0 downloadsMar 3, 2025
0 downloadsMar 4, 2025
85 downloadsMar 5, 2025
74 downloadsMar 6, 2025
55 downloadsMar 7, 2025
30 downloadsMar 8, 2025
34 downloadsMar 9, 2025
46 downloadsMar 10, 2025
39 downloadsMar 11, 2025
53 downloadsMar 12, 2025
73 downloadsMar 13, 2025
64 downloadsMar 14, 2025
47 downloadsMar 15, 2025
41 downloadsMar 16, 2025
58 downloadsMar 17, 2025
70 downloadsMar 18, 2025
65 downloadsMar 19, 2025
67 downloadsMar 20, 2025
66 downloadsMar 21, 2025
39 downloadsMar 22, 2025
32 downloadsMar 23, 2025
67 downloadsMar 24, 2025
70 downloadsMar 25, 2025
2,030 downloadsMar 26, 2025
80 downloadsMar 27, 2025
64 downloadsMar 28, 2025
31 downloadsMar 29, 2025
42 downloadsMar 30, 2025
38 downloadsMar 31, 2025
62 downloadsApr 1, 2025
58 downloadsApr 2, 2025
41 downloadsApr 3, 2025
0 downloadsApr 4, 2025
0 downloadsApr 5, 2025
30
2,030

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Last 365 days

This package has been downloaded 26,823 times in the last 365 days. The downloads are officially high enough to crash an underfunded departmental server. Quite an accomplishment! The day with the most downloads was Sep 03, 2024 with 6,109 downloads.

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Data provided by CRAN


Binaries


Dependencies

  • Imports6 packages
  • Suggests7 packages
  • Reverse Imports1 package