tidyestimate
A Tidy Implementation of 'ESTIMATE'
The 'ESTIMATE' package infers tumor purity from expression data as a function of immune and stromal infiltrate, but requires writing of intermediate files, is un-pipeable, and performs poorly when presented with modern datasets with current gene symbols. 'tidyestimate' a fast, tidy, modern reimagination of 'ESTIMATE' (2013) doi:10.1038/ncomms3612.
- Version1.1.1
- R version≥ 4.1.0
- LicenseGPL-2
- LicenseGPL-3
- Needs compilation?No
- Last release08/21/2023
Documentation
Team
Kai Aragaki
Paul Roebuck
Show author detailsRolesCopyright holderKosuke Yoshihara
Show author detailsRolesAuthorRahulsimham Vegesna
Show author detailsRolesAuthorHoon Kim
Show author detailsRolesAuthorRoel Verhaak
Show author detailsRolesAuthor
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- Imports5 packages
- Suggests2 packages