tmbstan

MCMC Sampling from 'TMB' Model Object using 'Stan'

CRAN Package

Enables all 'rstan' functionality for a 'TMB' model object, in particular MCMC sampling and chain visualization. Sampling can be performed with or without Laplace approximation for the random effects. This is demonstrated in Monnahan & Kristensen (2018) doi:10.1371/journal.pone.0197954.

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  • Depends1 package
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  • Linking To7 packages
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