trialr
Clinical Trial Designs in 'rstan'
A collection of clinical trial designs and methods, implemented in 'rstan' and R, including: the Continual Reassessment Method by O'Quigley et al. (1990) doi:10.2307/2531628; EffTox by Thall & Cook (2004) doi:10.1111/j.0006-341X.2004.00218.x; the two-parameter logistic method of Neuenschwander, Branson & Sponer (2008) doi:10.1002/sim.3230; and the Augmented Binary method by Wason & Seaman (2013) doi:10.1002/sim.5867; and more. We provide functions to aid model-fitting and analysis. The 'rstan' implementations may also serve as a cookbook to anyone looking to extend or embellish these models. We hope that this package encourages the use of Bayesian methods in clinical trials. There is a preponderance of early phase trial designs because this is where Bayesian methods are used most. If there is a method you would like implemented, please get in touch.
- Version0.1.6
- R versionunknown
- LicenseGPL (≥ 3)
- Needs compilation?Yes
- Last release03/12/2023
Documentation
- VignetteCRM: Continual Reassessment Method
- VignetteVisualisation with CRM
- VignetteDose pathways with CRM
- VignetteCRM Case Study 1 - Levy et al (2006)
- VignetteTime-to-Event Continual Reassessment Method
- VignetteNeuenschwanderBransonGsponer
- VignetteEffTox
- VignetteHierarchical Bayesian Model for Binary Responses
- VignetteBEBOP: Bayesian Evaluation of Bivariate Binary Outcomes and Predictive Information
- MaterialREADME
- MaterialNEWS
Team
Kristian Brock
Trustees of Columbia University
Show author detailsRolesCopyright holder
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Last 30 days
This package has been downloaded 451 times in the last 30 days. Now we're getting somewhere! Enough downloads to populate a lively group chat. The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 9 times.
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Last 365 days
This package has been downloaded 5,256 times in the last 365 days. That's a lot of interest! Someone might even write a blog post about it. The day with the most downloads was Feb 20, 2025 with 65 downloads.
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Dependencies
- Depends1 package
- Imports14 packages
- Suggests6 packages
- Linking To6 packages
- Reverse Imports3 packages