tsiR

An implementation of the time-series Susceptible-Infected-Recovered (TSIR) model using a number of different fitting options for infectious disease time series data. The manuscript based on this package can be found here doi:10.1371/journal.pone.0185528. The method implemented here is described by Finkenstadt and Grenfell (2000) doi:10.1111/1467-9876.00187.

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