viewpoly
A Shiny App to Visualize Genetic Maps and QTL Analysis in Polyploid Species
Provides a graphical user interface to integrate, visualize and explore results from linkage and quantitative trait loci analysis, together with genomic information for autopolyploid species. The app is meant for interactive use and allows users to optionally upload different sources of information, including gene annotation and alignment files, enabling the exploitation and search for candidate genes in a genome browser. In its current version, 'VIEWpoly' supports inputs from 'MAPpoly', 'polymapR', 'diaQTL', 'QTLpoly', 'polyqtlR', 'GWASpoly', and 'HIDECAN' packages.
- Version0.4.1
- R version≥ 4.0
- LicenseGPL (≥ 3)
- Needs compilation?No
- Languageen-US
- Last release03/28/2024
Documentation
Team
Cristiane Taniguti
Gabriel de Siqueira Gesteira
Show author detailsRolesAuthorJeekin Lau
Show author detailsRolesAuthorOlivia Angelin-Bonnet
Show author detailsRolesAuthorSusan Thomson
Show author detailsRolesContributorGuilherme da Silva Pereira
Show author detailsRolesContributorDavid Byrne
Show author detailsRolesContributorZhao-Bang Zeng
Show author detailsRolesContributorOscar Riera-Lizarazu
Show author detailsRolesContributorMarcelo Mollinari
Show author detailsRolesAuthor
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- Depends1 package
- Imports21 packages
- Suggests5 packages