agvgd

An R Implementation of the 'Align-GVGD' Method

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'Align-GVGD' ('A-GVGD') is a method to predict the impact of 'missense' substitutions based on the properties of amino acid side chains and protein multiple sequence alignments [doi:10.1136/jmg.2005.033878]. 'A-GVGD' is an extension of the original 'Grantham' distance to multiple sequence alignments. This package provides an alternative R implementation to the web version found on [http://agvgd.hci.utah.edu/].


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  • Imports12 packages
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