Thibaut Jombart
Author of 29 CRAN packages
Thibaut Jombart has been on fire, working on 29 packages to date. Honestly, does Thibaut Jombart even sleep? This is some serious dedication! Thibaut Jombart has collaborated with a whopping 112 other authors. It's basically a small army of coders! Who knew package development could be such a social event?
29 Packages
- EpiEstimEstimate Time Varying Reproduction Numbers from Epidemic Curves
- ade4Analysis of Ecological Data: Exploratory and Euclidean Methods in Environmental Sciences
- adegenetExploratory Analysis of Genetic and Genomic Data
- adephyloExploratory Analyses for the Phylogenetic Comparative Method
- adespatialMultivariate Multiscale Spatial Analysis
- apexPhylogenetic Methods for Multiple Gene Data
- cleanepiClean and Standardize Epidemiological Data
- distcreteDiscrete Distribution Approximations
- earlyREstimation of Transmissibility in the Early Stages of a Disease Outbreak
- epicontactsHandling, Visualisation and Analysis of Epidemiological Contacts
- epiflowsPredicting Disease Spread from Flow Data
- epitrixSmall Helpers and Tricks for Epidemics Analysis
- finalsizeCalculate the Final Size of an Epidemic
- hierfstatEstimation and Tests of Hierarchical F-Statistics
- i2extrasFunctions to Work with 'incidence2' Objects
- incidenceCompute, Handle, Plot and Model Incidence of Dated Events
- incidence2Compute, Handle and Plot Incidence of Dated Events
- linelistTagging and Validating Epidemiological Data
- matchmakerFlexible Dictionary-Based Cleaning
- o2geosocialReconstruction of Transmission Chains from Surveillance Data
- odinODE Generation and Integration
- outbreaker2Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data
- outbreaksA Collection of Disease Outbreak Data
- pegasPopulation and Evolutionary Genetics Analysis System
- projectionsProject Future Case Incidence
- reportfactoryLightweight Infrastructure for Handling Multiple R Markdown Documents
- treespaceStatistical Exploration of Landscapes of Phylogenetic Trees
- trendevalEvaluate Trending Models
- trendingModel Temporal Trends
Team
- Elisabeth Dahlqwist
- Anne Cori
- Justin Lessler
- Zhian N. Kamvar
- Simon Cauchemez
- Neil M. Ferguson
- Christophe Fraser
- P. Alex Demarsh
- Shikun Li
- Jonathan A. Polonsky
- Jake Stockwin
- Robin Thompson
- Rolina van Gaalen
- Aurélie Siberchicot
- Sandrine Pavoine
- Daniel Chessel
- Pierre Legendre
- Stéphane Dray
- Anne-Béatrice Dufour
- Jean Thioulouse
- Jean R. Lobry
- Sébastien Ollier
- Daniel Borcard
- Stéphanie Bougeard
- Federico Calboli
- Alexandre Courtiol
- Peter Solymos
- Klaus Schliep
- Brian J. Knaus
- Lindsay V. Clark
- Caitlin Collins
- Roman Lustrik
- Marie-Pauline Beugin
- Vladimir Mikryukov
- Tiago Maié
- Libor Morkovsky
- Ismail Ahmed
- RJ Ewing
- Frédéric Michaud
- Rebecca DeCamp
- Pavel Dimens
- Anders Ellern Bilgrau
- David Bauman
- Guillaume Blanchet
- Sylvie Clappe
- Guillaume Guenard
- Guillaume Larocque
- Naima Madi
- Hélène H Wagner
- Eric Archer
- Zhian Namir Kamvar
- Rebecca Harris
- Joshua W. Lambert
- Hugo Gruson
- Karim Mané
- Chris Hartgerink
- James M. Azam
- Pratik R. Gupte
- Bubacarr Bah
- Bankolé Ahadzie
- Nuredin Mohammed
- Abdoelnaser Degoot
- London School of Hygiene and Tropical Medicine, LSHTM
- data.org
- Rich FitzJohn
- Steph Locke
- Tim Taylor
- Pierre Nouvellet
- Janetta Skarp
- VP Nagraj
- Finlay Campbell
- Nistara Randhawa
- Bertrand Sudre
- Thomas Crellen
- Pawel Piatkowski
- Paula Moraga
- Isobel Blake
- Salla E. Toikkanen
- Dirk Schumacher
- Flavio Finger
- Charlie Whittaker
- Adam Kucharski
- Pratik Gupte
- Edwin Van Leeuwen
- Rosalind Eggo
- Andree Valle-Campos
- Jerome Goudet
- Olivier Hardy
- Jun Cai
- Sangeeta Bhatia
- Jakob Schumacher
- Juliet R.C. Pulliam
- Patrick Barks
- Sebastian Funk
- Alexis Robert
- Adam J Kucharski
- Imperial College of Science, Technology and Medicine
- Gerry Tonkin-Hill
- Rich Fitzjohn
- Kristjan Eldjarn
- Eric Brown
- Sang Woo Park
- Simon Frost
- Emmanuel Paradis
- David Winter
- Brian Knaus
- Alastair Potts
- Stephane Ghozzi
- Amy Gimma
- Michelle Kendall
- Jacob Almagro-Garcia
- Caroline Colijn