Thibaut Jombart
Author of 29 CRAN packages
Thibaut Jombart has worked on 29 packages, which is nothing short of amazing. Who needs sleep when you've got code to write? Thibaut Jombart teamed up with 115 other developers, making this project a gigantic collaborative effort. The coding world is a better place for it!
29 Packages
- EpiEstimEstimate Time Varying Reproduction Numbers from Epidemic Curves
- ade4Analysis of Ecological Data: Exploratory and Euclidean Methods in Environmental Sciences
- adephyloExploratory Analyses for the Phylogenetic Comparative Method
- adespatialMultivariate Multiscale Spatial Analysis
- apexPhylogenetic Methods for Multiple Gene Data
- cleanepiClean and Standardize Epidemiological Data
- distcreteDiscrete Distribution Approximations
- earlyREstimation of Transmissibility in the Early Stages of a Disease Outbreak
- epicontactsHandling, Visualisation and Analysis of Epidemiological Contacts
- epiflowsPredicting Disease Spread from Flow Data
- epitrixSmall Helpers and Tricks for Epidemics Analysis
- finalsizeCalculate the Final Size of an Epidemic
- hierfstatEstimation and Tests of Hierarchical F-Statistics
- i2extrasFunctions to Work with 'incidence2' Objects
- incidenceCompute, Handle, Plot and Model Incidence of Dated Events
- incidence2Compute, Handle and Plot Incidence of Dated Events
- linelistTagging and Validating Epidemiological Data
- matchmakerFlexible Dictionary-Based Cleaning
- o2geosocialReconstruction of Transmission Chains from Surveillance Data
- odinODE Generation and Integration
- outbreaker2Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data
- outbreaksA Collection of Disease Outbreak Data
- pegasPopulation and Evolutionary Genetics Analysis System
- projectionsProject Future Case Incidence
- reportfactoryLightweight Infrastructure for Handling Multiple R Markdown Documents
- treespaceStatistical Exploration of Landscapes of Phylogenetic Trees
- trendevalEvaluate Trending Models
- trendingModel Temporal Trends
- adegenetExploratory Analysis of Genetic and Genomic Data
Team
- Elisabeth Dahlqwist
- Anne Cori
- Justin Lessler
- Zhian N. Kamvar
- Simon Cauchemez
- Neil M. Ferguson
- Christophe Fraser
- P. Alex Demarsh
- Shikun Li
- Jonathan A. Polonsky
- Jake Stockwin
- Robin Thompson
- Rolina van Gaalen
- Jean Thioulouse
- Sébastien Ollier
- Stéphane Dray
- Jean R. Lobry
- Pierre Legendre
- Daniel Borcard
- Stéphanie Bougeard
- Anne-Béatrice Dufour
- Aurélie Siberchicot
- Daniel Chessel
- Sandrine Pavoine
- Anders Ellern Bilgrau
- Sylvie Clappe
- Guillaume Guenard
- Guillaume Larocque
- Naima Madi
- Guillaume Blanchet
- David Bauman
- John Chambers
- Hélène H Wagner
- Klaus Schliep
- Eric Archer
- Zhian Namir Kamvar
- Rebecca Harris
- Abdoelnaser Degoot
- Joshua W. Lambert
- Bubacarr Bah
- data.org
- London School of Hygiene and Tropical Medicine, LSHTM
- Chris Hartgerink
- Hugo Gruson
- Nuredin Mohammed
- Karim Mané
- James M. Azam
- Pratik R. Gupte
- Bankolé Ahadzie
- Andree Valle-Campos
- Rich FitzJohn
- Steph Locke
- Tim Taylor
- Pierre Nouvellet
- Janetta Skarp
- VP Nagraj
- Finlay Campbell
- Nistara Randhawa
- Bertrand Sudre
- Thomas Crellen
- Pawel Piatkowski
- Paula Moraga
- Isobel Blake
- Salla E. Toikkanen
- Dirk Schumacher
- Flavio Finger
- Charlie Whittaker
- Adam Kucharski
- Pratik Gupte
- Edwin Van Leeuwen
- Rosalind Eggo
- Jerome Goudet
- Olivier Hardy
- Jun Cai
- Sangeeta Bhatia
- Jakob Schumacher
- Juliet R.C. Pulliam
- Patrick Barks
- Sebastian Funk
- Alexis Robert
- Adam J Kucharski
- Imperial College of Science, Technology and Medicine
- Gerry Tonkin-Hill
- Rich Fitzjohn
- Kristjan Eldjarn
- Eric Brown
- Sang Woo Park
- Simon Frost
- Emmanuel Paradis
- David Winter
- Brian Knaus
- Alastair Potts
- Stephane Ghozzi
- Amy Gimma
- Michelle Kendall
- Jacob Almagro-Garcia
- Caroline Colijn
- Peter Solymos
- Federico Calboli
- Alexandre Courtiol
- Frédéric Michaud
- Libor Morkovsky
- Caitlin Collins
- Vladimir Mikryukov
- Roman Lustrik
- Marie-Pauline Beugin
- RJ Ewing
- Brian J. Knaus
- Pavel Dimens
- Rebecca DeCamp
- Tiago Maié
- Ismail Ahmed
- Lindsay V. Clark
- Max Coulter
- Ivan Krylov